Enrichment protocol

Information about how a biomaterial is enriched for a feature or characteristic of interest.

Properties

Markersenrichment_protocol.markers (string) A list of markers used to enrich for or against certain cells. For example "CD4+ CD8-" or "HLA-G+".

Maximum size selectedenrichment_protocol.maximum_size (number) Maximum cell or organelle size passing selection, in microns. For example "90".

Minimum size selectedenrichment_protocol.minimum_size (number) Minimum cell or organelle size passing selection, in microns. For example "70".

Process type ontology IDenrichment_protocol.method.ontology (string from process_type_ontology) An ontology term identifier in the form prefix:accession. For example "EFO:0009128" or "EFO:0009121".Graph restriction: Subclasses of EFO:0002694 from obo:efo.

Process type ontology labelenrichment_protocol.method.ontology_label (string from process_type_ontology) The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field. For example "enzymatic dissociation" or "blood draw".

Process typeRequiredenrichment_protocol.method.text (string from process_type_ontology) The name of a process type being used. For example "enzymatic dissociation" or "blood draw".

Document filenameenrichment_protocol.protocol_core.document (string from protocol_core) A filename of a PDF document containing the details of the protocol. For example "my_cool_protocol.pdf".

Protocol descriptionenrichment_protocol.protocol_core.protocol_description (string from protocol_core) A general description of the protocol.

Protocol IDRequiredenrichment_protocol.protocol_core.protocol_id (string from protocol_core) A unique ID for the protocol.

Protocol nameenrichment_protocol.protocol_core.protocol_name (string from protocol_core) A short name for the protocol.

protocols.io DOIenrichment_protocol.protocol_core.protocols_io_doi (string from protocol_core) The protocols.io digital object identifier (doi) for the protocol. For example "10.17504/protocols.io.mgjc3un".

Publication DOIenrichment_protocol.protocol_core.publication_doi (string from protocol_core) The publication digital object identifier (doi) for the protocol. For example "10.1101/193219".

Accessionenrichment_protocol.provenance.accession (string from provenance) A unique accession for this entity, provided by the broker.

Document IDRequiredenrichment_protocol.provenance.document_id (string from provenance) Identifier for document.

Schema major versionenrichment_protocol.provenance.schema_major_version (integer from provenance) The major version number of the schema. For example "4" or "10".

Schema minor versionenrichment_protocol.provenance.schema_minor_version (integer from provenance) The minor version number of the schema. For example "6" or "15".

Submission dateRequiredenrichment_protocol.provenance.submission_date (string from provenance) When project was first submitted to database.

Submitter IDenrichment_protocol.provenance.submitter_id (string from provenance) ID of individual who first submitted project.

Update dateenrichment_protocol.provenance.update_date (string from provenance) When project was last updated.

Updater IDenrichment_protocol.provenance.updater_id (string from provenance) ID of individual who last updated project.