Channel

Information about a single microscope channel.

Properties

Channel IDRequiredchannel.channel_id (string) User given ID. If there is an accompanying codebook, this name should correspond to the channel id used in the codebook. For example "1" or "A".

Excitation wavelengthRequiredchannel.excitation_wavelength (number) Excitation wavelength of the lightsource in nanometers. For example "640".

Exposure timeRequiredchannel.exposure_time (number) Acquisition time for a single image per channel, in milliseconds. For example "400".

Filter rangeRequiredchannel.filter_range (string) Emission filter in nanometers. For example "461/70".

Multiplexed experimentRequiredchannel.multiplexed (string enum) Whether multiple targets were detected simultaneously in this channel. Should be one of: "yes" or "no".

Target fluorophorechannel.target_fluorophore (string) The name of the fluorophore this channel is designed to assay. For example "Alexa 647".

Used by