Update: A preview of the HCA DCP 2.0 data is now available.View DCP 2.0 Data Preview|Learn More


Enrichment protocol

Information about how a biomaterial is enriched for a feature or characteristic of interest.

View JSON source: enrichment_protocoldoneShow required fields only


Markersenrichment_protocol.markerscopy (string) A list of markers used to enrich for or against certain cells. For example "CD4+ CD8-" or "HLA-G+".
Maximum size selectedenrichment_protocol.maximum_sizecopy (number) Maximum cell or organelle size passing selection, in microns. For example "90".
Minimum size selectedenrichment_protocol.minimum_sizecopy (number) Minimum cell or organelle size passing selection, in microns. For example "70".
Enrichment protocol>Enrichment methodRequired (process_type_ontology object) The method by which enrichment was achieved.
Process type ontology IDenrichment_protocol.method.ontologycopy (string from process_type_ontology) An ontology term identifier in the form prefix:accession. For example "EFO:0009128" or "EFO:0009121".Graph restriction: Subclasses of EFO:0002694 from obo:efo.
Process type ontology labelenrichment_protocol.method.ontology_labelcopy (string from process_type_ontology) The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field. For example "enzymatic dissociation" or "blood draw".
Process typeRequiredenrichment_protocol.method.textcopy (string from process_type_ontology) The name of a process type being used. For example "enzymatic dissociation" or "blood draw".
Enrichment protocol>Protocol coreRequired (protocol_core object) Core protocol-level information.
Document filenameenrichment_protocol.protocol_core.documentcopy (string from protocol_core) A filename of a PDF document containing the details of the protocol. For example "my_cool_protocol.pdf".
Protocol descriptionenrichment_protocol.protocol_core.protocol_descriptioncopy (string from protocol_core) A general description of the protocol.
Protocol IDRequiredenrichment_protocol.protocol_core.protocol_idcopy (string from protocol_core) A unique ID for the protocol.
Protocol nameenrichment_protocol.protocol_core.protocol_namecopy (string from protocol_core) A short name for the protocol.
protocols.io DOIenrichment_protocol.protocol_core.protocols_io_doicopy (string from protocol_core) The protocols.io digital object identifier (doi) for the protocol. For example "10.17504/protocols.io.mgjc3un".
Publication DOIenrichment_protocol.protocol_core.publication_doicopy (string from protocol_core) The publication digital object identifier (doi) for the protocol. For example "10.1101/193219".
Enrichment protocol>provenance (provenance object) Provenance information provided by the system.
Accessionenrichment_protocol.provenance.accessioncopy (string from provenance) A unique accession for this entity, provided by the broker.
Document IDRequiredenrichment_protocol.provenance.document_idcopy (string from provenance) Identifier for document.
Schema major versionenrichment_protocol.provenance.schema_major_versioncopy (integer from provenance) The major version number of the schema. For example "4" or "10".
Schema minor versionenrichment_protocol.provenance.schema_minor_versioncopy (integer from provenance) The minor version number of the schema. For example "6" or "15".
Submission dateRequiredenrichment_protocol.provenance.submission_datecopy (string from provenance) When project was first submitted to database.
Submitter IDenrichment_protocol.provenance.submitter_idcopy (string from provenance) ID of individual who first submitted project.
Update dateenrichment_protocol.provenance.update_datecopy (string from provenance) When project was last updated.
Updater IDenrichment_protocol.provenance.updater_idcopy (string from provenance) ID of individual who last updated project.