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Metadata

Process

Information about a process completed in the experiment.

View JSON source: processdoneShow required fields only

Properties

Deviation from protocolprocess.deviation_from_protocolfile_copy (string) A deviation from the protocol provided. For example "Skipped ACK lysis step" or "Used 100um filter instead of 40um filter".
End timeprocess.end_timefile_copy (string) Date and time the process ended. For example "2019-01-16T12:00:00Z" or "2019/01/16".
Length of timeprocess.length_of_timefile_copy (string) Length of time the process took to execute in Length of time unit. For example "10" or "55-60".
Start timeprocess.start_timefile_copy (string) Date and time the process started. For example "2019-01-16T12:00:00Z" or "2019/01/16".
Process>INSDC experiment accession (insdc_experiment) An International Nucleotide Sequence Database Collaboration (INSDC) experiment accession.
INSDC experiment accessionRequiredprocess.insdc_experiment.insdc_experiment_accessionfile_copy (string from insdc_experiment) An International Nucleotide Sequence Database Collaboration (INSDC) experiment accession. For example "SRX0000000".
Process>Length of time unit (time_unit_ontology) The unit in which Length of time is expressed.
Time unit ontology IDprocess.length_of_time_unit.ontologyfile_copy (string from time_unit_ontology) An ontology term identifier in the form prefix:accession. For example "UO:0000010" or "UO:0000034".Graph restriction: Subclasses of UO:0000003, UO:0000149 from obo:efo or obo:uo.
Time unit ontology labelprocess.length_of_time_unit.ontology_labelfile_copy (string from time_unit_ontology) The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field. For example "second" or "week".
Time unitRequiredprocess.length_of_time_unit.textfile_copy (string from time_unit_ontology) The name of a time unit being used. For example "second" or "week".
Process>Process type (process_type_ontology) The type of process.
Process type ontology IDprocess.type.ontologyfile_copy (string from process_type_ontology) An ontology term identifier in the form prefix:accession. For example "EFO:0009128" or "EFO:0009121".Graph restriction: Subclasses of EFO:0002694 from obo:efo.
Process type ontology labelprocess.type.ontology_labelfile_copy (string from process_type_ontology) The preferred label for the ontology term referred to in the ontology field. This may differ from the user-supplied value in the text field. For example "enzymatic dissociation" or "blood draw".
Process typeRequiredprocess.type.textfile_copy (string from process_type_ontology) The name of a process type being used. For example "enzymatic dissociation" or "blood draw".
Process>Process coreRequired (process_core) Core process-level information.
Locationprocess.process_core.locationfile_copy (string from process_core) Location where the process took place. For example "Wellcome Trust Sanger Institute" or "Cancer Institute Stanford University".
Operator(s)process.process_core.operatorsfile_copy (array from process_core) Identifier for individual(s) who executed the process. For example "Technician 1", "JD" or "John Doe".
Process descriptionprocess.process_core.process_descriptionfile_copy (string from process_core) A general description of the process.
Process IDRequiredprocess.process_core.process_idfile_copy (string from process_core) A unique ID for the process.
Process nameprocess.process_core.process_namefile_copy (string from process_core) A short, descriptive name for the process that need not be unique.
Process>provenance (provenance) Provenance information provided by the system.
Accessionprocess.provenance.accessionfile_copy (string from provenance) A unique accession for this entity, provided by the broker.
Document IDRequiredprocess.provenance.document_idfile_copy (string from provenance) Identifier for document.
Schema major versionprocess.provenance.schema_major_versionfile_copy (integer from provenance) The major version number of the schema. For example "4" or "10".
Schema minor versionprocess.provenance.schema_minor_versionfile_copy (integer from provenance) The minor version number of the schema. For example "6" or "15".
Submission dateRequiredprocess.provenance.submission_datefile_copy (string from provenance) When project was first submitted to database.
Submitter IDprocess.provenance.submitter_idfile_copy (string from provenance) ID of individual who first submitted project.
Update dateprocess.provenance.update_datefile_copy (string from provenance) When project was last updated.
Updater IDprocess.provenance.updater_idfile_copy (string from provenance) ID of individual who last updated project.