| A Protocol for Revealing Oral Neutrophil Heterogeneity by Single-Cell Immune Profiling in Human Saliva | Homo sapiens | Smart-seq2 | oral cavity | | 1,145 |
| A Single-Cell Atlas of the Human Healthy Airways | Homo sapiens | 10x 3' v2 | 3 anatomical entities | | 77,969 |
| A cellular census of human lungs identifies novel cell states in health and in asthma | Homo sapiens | 2 library construction methods | 2 anatomical entities | normal chronic obstructive pulmonary disease | 47,291 |
| A single-cell atlas of human teeth | Homo sapiens | 10x 3' v2 sequencing | molar tooth | | 100,000 |
| Allergic inflammatory memory in human respiratory epithelial progenitor cells | Homo sapiens | Seq-Well | nose | | 36,740 |
| An Atlas of Cells in the Human Tonsil | Homo sapiens | 7 library construction methods | palatine tonsil | | 357,000 |
| Comprehensive cell atlas of the first-trimester developing human brain | Homo sapiens | 2 library construction methods | 2 anatomical entities | | 1,665,937 |
| Defining human mesenchymal and epithelial heterogeneity in response to oral inflammatory disease | Homo sapiens | 10x 3' v3 | mouth | normal chronic periodontitis | Unspecified |
| Distinct fibroblast progenitor subpopulation expedites regenerative mucosal healing by immunomodulation | 2 species | 10x 3' v2 | mouth | | 6,653 |
| High-Resolution Transcriptomic Landscape of the Human Submandibular Gland. | Homo sapiens | 10x 3' v2 | mouth | | 15,695 |
| Human SARS-CoV-2 challenge resolves local and systemic response dynamics | Homo sapiens | 2 library construction methods | 2 anatomical entities | | 606,074 |
| Human oral mucosa cell atlas reveals a stromal-neutrophil axis regulating tissue immunity | Homo sapiens | 10x 3' V3 sequencing | mouth mucosa | normal periodontal disease | 88,000 |
| Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer | Homo sapiens | 10X 3' v2 sequencing | 2 anatomical entities | | 126,000 |
| Integrated single-cell transcriptomics and epigenomics reveals strong germinal center–associated etiology of autoimmune risk loci | Homo sapiens | 2 library construction methods | tonsil | | Unspecified |
| Lifespan charactarization of the nasal mucosa | Homo sapiens | 10x 3' v3 | nose | | Unspecified |
| Local and systemic responses to SARS-CoV-2 infection in children and adults | Homo sapiens | 2 library construction methods | 3 anatomical entities | | 659,217 |
| RNA-Seq from human innate lymphoid cells (ILCs) transitional populations. | Homo sapiens | cDNA library construction | tonsil | | 15,000 |
| SARS-CoV-2 infection of the oral cavity and saliva. | Homo sapiens | 10X 3' v3 | mouth | | 13,824 |
| SARS-CoV-2 receptor ACE2 is an interferon-stimulated gene in human airway epithelial cells and is detected in specific cell subsets across tissues. | 2 species | 4 library construction methods | 4 anatomical entities | | 33,844 |
| Salivary ZG16B expression loss follows exocrine gland dysfunction related to oral chronic graft-versus-host disease. | Homo sapiens | 10x 3' v3 | saliva-secreting gland | | 21,402 |
| Single cell RNA-sequencing of human tonsil Innate lymphoid cells (ILCs) | Homo sapiens | Smart-seq2 | tonsil | obstructive sleep apnea syndrome | 648 |
| Single-Cell Transcriptomic Profiling of Human Dental Pulp in Sound and Carious Teeth: A Pilot Study | Homo sapiens | 10x 3' v2 | 2 anatomical entities | | 6,810 |
| Single-cell RNA sequencing of human nasal swab from healthy donors | Homo sapiens | barcoded plate-based single cell RNA-seq | nose | | Unspecified |
| Single-cell analysis of human B cell maturation predicts how antibody class switching shapes selection dynamics | Homo sapiens | 3 library construction methods | palatine tonsil | | 52,541 |
| Single-cell sequencing unveils the heterogeneity of nonimmune cells in chronic apical periodontitis | Homo sapiens | 10x 3' v2 | molar tooth | chronic apical periodontitis | 26,737 |
| Single-cell transcriptomic analysis of gingivo-buccal oral cancer reveals two dominant cellular programs | Homo sapiens | 10x 3' v3 | mouth | | 52,393 |
| Tabula Muris: Transcriptomic characterization of 20 organs and tissues from Mus musculus at single cell resolution | Mus musculus | Smart-seq2 | 18 anatomical entities | | 100,605 |
| The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans | Homo sapiens | 3 library construction methods | 24 anatomical entities | | 481,120 |
| The myogenesis program drives clonal selection and drug resistance in rhabdomyosarcoma | Homo sapiens | 5 library construction methods | 12 anatomical entities | | 764,251 |
