HCA Data Explorer

Microglia Require CD4 T Cells to Complete the Fetal-to-Adult Transition.

Updated February 15, 2022

The brain is a site of relative immune privilege. Although CD4 T cells have been reported in the central nervous system, their presence in the healthy brain remains controversial, and their function remains largely unknown. We used a combination of imaging, single cell, and surgical approaches to identify a CD69+ CD4 T cell population in both the mouse and human brain, distinct from circulating CD4 T cells. The brain-resident population was derived through in situ differentiation from activated circulatory cells and was shaped by self-antigen and the peripheral microbiome. Single-cell sequencing revealed that in the absence of murine CD4 T cells, resident microglia remained suspended between the fetal and adult states. This maturation defect resulted in excess immature neuronal synapses and behavioral abnormalities. These results illuminate a role for CD4 T cells in brain development and a potential interconnected dynamic between the evolution of the immunological and neurological systems.

Adrian ListonVlaams Instituut voor Biotechnologieadrian.liston@babraham.ac.uk
Emanuela Pasciuto1
Oliver T Burton2
Carlos P Roca2
Vasiliki Lagou1
Wenson D Rajan1
Tom Theys3
Renzo Mancuso1
Raul Y Tito4
Lubna Kouser2
Zsuzsanna Callaerts-Vegh4
Alerie G de la Fuente5
Teresa Prezzemolo1
Loriana G Mascali1
Aleksandra Brajic1
Carly E Whyte2
Lidia Yshii1
Anna Martinez-Muriana1
Michelle Naughton5
Andrew Young5
Alena Moudra2
Pierre Lemaitre1
Suresh Poovathingal1
Jeroen Raes4
Bart De Strooper1
Denise C Fitzgerald5
James Dooley2
Adrian Liston1
1Vlaams Instituut voor Biotechnologie
2Babraham Institute
3Universitair Ziekenhuis Leuven
4KU Leuven
5Queen's University Belfast
Ray Stefancsik

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/e5d45579-1f5b-48c3-b568-320d93e7ca72
None
GEO Series Accessions:
GSE144038, GSE146165
INSDC Project Accessions:INSDC Study Accessions:

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Analysis Portals

None

Project Label

CD4_T_cells_in_brain

Species

2 species

Sample Type

specimens

Anatomical Entity

brain

Organ Part

temporal cortex

Selected Cell Types

peripheral blood mononuclear cell

Disease Status (Specimen)

epilepsy

Disease Status (Donor)

epilepsy

Development Stage

3 development stages

Library Construction Method

10X 3' v2 sequencing

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

count_matrix_generation_human, count_matrix_generation_mouse, optimus_post_processing_v1.0.0, optimus_v4.2.3

File Format

5 file formats

Cell Count Estimate

15.0k

Donor Count

8
bam3 file(s)fastq.gz78 file(s)loom4 file(s)tar1 file(s)txt.gz5 file(s)