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Plasticity of distal nephron epithelia from human kidney organoids enables the induction of ureteric tip and stalk.

Updated March 10, 2023

During development, distinct progenitors contribute to the nephrons versus the ureteric epithelium of the kidney. By performing single-cell RNA sequencing on iPSC-derived kidney organoids and primary fetal kidney tissue and by reanalysing the transcriptional distinction between distal nephron and ureteric epithelium in human fetal kidney, the authors show that while existing nephron-containing kidney organoids contain distal nephron epithelium and no ureteric epithelium, this distal nephron segment alone displays significant in vitro plasticity and can adopt a ureteric epithelial tip identity when isolated and cultured in defined conditions.

Melissa H LittleMurdoch Children’s Research Institutemelissa.little@mcri.edu.au
Sara E Howden1
Sean B Wilson1
Ella Groenewegen1
Lakshi Starks1
Thomas A Forbes1
Ker Sin Tan1
Jessica M Vanslambrouck1
Emily M Holloway2
Yi-Hsien Chen3
Sanjay Jain3
Jason R Spence2
Melissa H Little1
1Murdoch Children’s Research Institute
2University of Michigan Medical School
3Washington University
Ami Day

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/e57dc176-ab98-446b-90c2-89e0842152fd
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INSDC Project Accessions:GEO Series Accessions:INSDC Study Accessions:

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Analysis Portals

None

Project Label

KidneyOrganoidsPlasticity

Species

Homo sapiens

Sample Type

organoids

Anatomical Entity

Unspecified

Organ Part

Unspecified

Selected Cell Types

Unspecified

Model Organ

kidney

Disease Status (Specimen)

Unspecified

Disease Status (Donor)

normal

Development Stage

neonate

Library Construction Method

2 library construction methods

Nucleic Acid Source

2 nucleic acid sources

Paired End

false, true

Analysis Protocol

analysis_protocol_bulk_cells, analysis_protocol_single_cells

File Format

4 file formats

Cell Count Estimate

10.0k

Donor Count

1
fastq.gz90 file(s)tar1 file(s)txt.gz3 file(s)xlsx1 file(s)