HCA Data Explorer

The ZIP8/SIRT1 axis regulates alveolar progenitor cell renewal in aging and idiopathic pulmonary fibrosis

Updated August 27, 2023

Type 2 alveolar epithelial cells (AEC2s) function as progenitor cells in the lung. We have shown previously that failure of AEC2 regeneration results in progressive lung fibrosis in mice and is a cardinal feature of idiopathic pulmonary fibrosis (IPF). In this study, we identified deficiency of a specific zinc transporter, SLC39A8 (ZIP8), in AEC2s from both IPF lungs and lungs of old mice. Loss of ZIP8 expression was associated with impaired renewal capacity of AEC2s and enhanced lung fibrosis. ZIP8 regulation of AEC2 progenitor function was dependent on SIRT1. Replenishment with exogenous zinc and SIRT1 activation promoted self-renewal and differentiation of AEC2s from lung tissues of IPF patients and old mice.

Jiurong LiangCedars-Sinai Medical Centercarol.liang@cshs.org
Paul W NobleCedars-Sinai Medical Centerpaul.noble@cshs.org
Jiurong Liang1
Guanling Huang1
Xue Liu1
Forough Taghavifar1
Ningshan Liu1
Yizhou Wang1
Nan Deng1
Changfu Yao1
Ting Xie1
Vrishika Kulur1
Kristy Dai1
Ankita Burman1
Simon C Rowan1
S Samuel Weigt2
John Belperio2
Barry Stripp1
William C Parks1
Dianhua Jiang1
Paul W Noble1
1Cedars-Sinai Medical Center
2UCLA
Anu Shivalikanjli

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/e456c042-f6b6-4cec-a338-1a8ef80bd779
None
INSDC Project Accessions:GEO Series Accessions:
GSE157997, GSE187027
INSDC Study Accessions:

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Analysis Portals

None

Project Label

Liang_Human_Mouse_IPFlung_10x

Species

2 species

Sample Type

specimens

Anatomical Entity

lung

Organ Part

Unspecified

Selected Cell Types

epithelial cell

Disease Status (Specimen)

pulmonary fibrosis

Disease Status (Donor)

2 disease statuses

Development Stage

2 development stages

Library Construction Method

10x 3' v2

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

analysis_alignment_human, analysis_alignment_mouse

File Format

6 file formats

Cell Count Estimate

26.1k

Donor Count

38
csv.gz26 file(s)fastq.gz720 file(s)h56 file(s)mtx.gz6 file(s)tsv.gz12 file(s)xlsx1 file(s)