Transcriptomic and clonal characterization of T cells in the human central nervous system.
Updated July 19, 2023Tissues develop unique homeostatic immune states through specific recruitment of immune cells that are further shaped by the tissue environment. Single-cell RNA of healthy cerebrospinal fluid (CSF) and single-nucleus RNA sequencing of brain parenchyma was used to profile the T cell state in the human central nervous system (CNS).
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Analysis Portals
NoneProject Label
TCellsHumanCentralNervousSystemSpecies
Sample Type
Anatomical Entity
Organ Part
Selected Cell Types
Disease Status (Specimen)
Disease Status (Donor)
Development Stage
Library Construction Method
Nucleic Acid Source
Paired End
falseAnalysis Protocol
optimus_post_processing_v1.0.0, optimus_v4.2.3File Format
Cell Count Estimate
50.5kDonor Count
3