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Single-cell RNA-seq to decipher the subpopulations of human decidual leukocytes in normal and RSA pregnancies

Updated January 10, 2024

Maternal fetal immune tolerance is a biological event that plays a key role in pregnancy. In particular, the mechanism by which the maternal immune system does not exclude the semi-identical antigen of the fetus has not been fully answered so far. The most serious result of the maternal fetal immune tolerance balance is the recurrent spontaneous abortion (RSA). The fetus is rejected by the mother in the early pregnancy and cannot continue to develop in the uterus. Based on these scientific questions, we used single-cell sequencing technology to analyze nearly 30,000 leukocytes in the decidua of normal and RSA. A total of 13 immune cell subsets were found, of which dNK cells were more prominent, The lineage differentiation pathway of dNK cells was excavated, and the pathological role of dNK differentiation abnormality in the occurrence of RSA was analyzed. Our results deepen our understanding of the differentiation and function of human decidual leukocytes, especially dNK cells. We clearly recognize that the immune system has dynamic changes compared with normal pregnancy under pathological conditions, which is likely to occur in RSA. The important factors, we expect our results to provide a new basis for RSA's immune diagnosis and treatment strategy. Overall design: Single cell sequencing on decidual immune cellss was performed from normmal pregnancy women and recurrent spontaneous abortion (RSA) patients. CD45+ leukocytes were sorted from decidua at early pregnancy period through MoFLo XDP.

Yan-Ling WangInstitute of Zoology, Chinese Academy of Scienceswangyl@ioz.ac.cn
Yan-Ling Wang (Principal Investigator)1
Rong Li2
1Institute of Zoology, Chinese Academy of Sciences
2Peking University Third Hospital
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To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/c302fe54-d22d-451f-a130-e24df3d6afca
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INSDC Project Accessions:GEO Series Accessions:INSDC Study Accessions:

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Analysis Portals

None

Project Label

HumanDecidualLeukocytes

Species

Homo sapiens

Sample Type

specimens

Anatomical Entity

uterus

Organ Part

decidua

Selected Cell Types

leukocyte

Disease Status (Specimen)

2 disease statuses

Disease Status (Donor)

2 disease statuses

Development Stage

human adult stage

Library Construction Method

10x 3' v2

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

analysis_protocol_1

File Format

4 file formats

Cell Count Estimate

30.0k

Donor Count

6
csv.gz1 file(s)fastq.gz12 file(s)RData.gz1 file(s)xlsx1 file(s)