Refining Colorectal Cancer Classification and Clinical Stratification Through a Single-Cell Atlas
Updated September 16, 2022To determine and dissect the extent of tumor, immunological, and stromal heterogeneity in CRC patients, we performed droplet-based scRNA-seq on 16 racially diverse, treatment naïve CRC patient tissue samples and seven adjacent normal colonic tissue samples (totaling 23 samples), yielded 49,589 single cells enabling high-resolution depiction of the cellular diversity and heterogeneity within the tumor and microenvironmental cells.
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Analysis Portals
NoneProject Label
colorectalCancerAtlasSpecies
Sample Type
Anatomical Entity
Organ Part
Selected Cell Types
Disease Status (Specimen)
Disease Status (Donor)
Development Stage
Library Construction Method
Nucleic Acid Source
Paired End
falseAnalysis Protocol
analysis_protocol_1, analysis_protocol_2, analysis_protocol_3File Format
Cell Count Estimate
49.6kDonor Count
16