HCA Data Explorer

Single-cell profiling of human subventricular zone progenitors identifies SFRP1 as a target for stimulating progenitor activation

Updated August 30, 2022

Following the decline of neurogenesis at birth, progenitors of the subventricular zone (SVZ) remain mostly in a quiescent state in the adult human brain. The mechanisms that regulate this quiescent state are still unclear. Here, we isolated CD271+ progenitors from the aged human SVZ for single-cell RNA sequencing analysis. Our transcriptome data revealed the identity of progenitors of the aged human SVZ as late oligodendrocyte progenitor cells. We identified the Wnt pathway antagonist SFRP1 as a possible signal that promotes quiescence of progenitors from the aged human SVZ. Administration of WAY-316606, a small molecule that inhibits SFRP1 function, stimulates activation of neural stem cells both in vitro and in vivo under homeostatic conditions. Our data unravel a possible mechanism through which progenitors of the adult human SVZ are maintained in a quiescent state and a potential target for stimulating progenitors to re-activate.

Vanessa DonegaUniversity Medical Center UtrechtV.Donega@umcutrecht.nl
Vanessa Donega1
Astrid Van der Geest1
Jacqueline Sluijs1
Roland Van Dijk2
Chi Chiu Wang3
Onur Basak1
R. Jeroen Pasterkamp (Principal Investigator)1
Elly Hol (Principal Investigator)1
1University Medical Center Utrecht
2Brain Center Rudolf Magnus
3The Chinese University of Hong Kong
Enrique Sapena Ventura

To reference this project, please use the following link:

https://explore.data.humancellatlas.org/projects/3cdaf942-f8ad-42e8-a77b-4efedb9ea7b6
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Analysis Portals

None

Project Label

subventricularHumanProgenitor

Species

Homo sapiens

Sample Type

specimens

Anatomical Entity

brain

Organ Part

Unspecified

Selected Cell Types

3 cell types

Disease Status (Specimen)

normal

Disease Status (Donor)

normal

Development Stage

human adult stage

Library Construction Method

SORT-seq

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

alignment_processing, filtering_normalization

File Format

3 file formats

Cell Count Estimate

728

Donor Count

3
fastq.gz40 file(s)tsv.gz5 file(s)xlsx1 file(s)