Visualization Packages
Visualization packages listed below are JavaScript modules that enable analysis through interactive data exploration on the web. To ease integration into portals, these web components are all available as NPM packages and can be imported using standard ES6 syntax. They each provide domain-specific ways to visualize biological data produced by Human Cell Atlas.
These solutions are built by third parties. This information is provided as a service to the community and does not constitute an endorsement by the HCA.
Are you developing a package that can consume HCA data? Please submit it for inclusion in the registry.
Expression Atlas Anatomogram
Expression Atlas developers
Anatomogram component for Expression Atlas heatmap.
Ideogram.js
Eric Weitz
Chromosome visualization with D3.js.
igv.js
James Robinson, Douglass Turner, Helga Thorvaldsdottir, Jill Mesirov
igv.js is an embeddable interactive genome visualization component based on the desktop Integrative Genomics Viewer (IGV).
Morpheus
Joshua Gould
Versatile matrix visualization and analysis software.
